Japan trip in June - please help!

Hello,
Can you please let me know what the best pass would be for the following itinerary:

• Arrive in Narita airport at 9:00 pm and we need to get to our hotel in Tokyo (located near the Tokyo City Air Terminal).
• After 3 days we made a reservation in a ryokan in Hakone (Gora Station).
• We stay for one night, then leave for Kyoto the next day. We are staying at the MIMARU Kyoto Horikawarokkaku (249, Tsuboyacho, Horikawadorirokkakusagaru, Nakagyo-ku Kyoto-shi, Kyoto, 604-8255).
• We stay there for 4 days and then we need to get back to Narita Airport to return home.

So basically, Narita - Tokyo - Hakone - Kyoto - Narita

Can you please let me know what pass I should get? And will I be able to travel with all my luggage (about 4 big suitcases)?

Thank you for any information you can give me!