Do I need Japan Rail Pass

Hi

I,m planning to visit Japan on 1st of May 2014 for two weeks,I have two options;

5 Nights in osaka ( Tennoji Area)
@ 1 day round trip to Hiroshima

2 Nights Kyoto ( Gion ), Using Haruka Express from Tennoji to kyoto station
5 Nights in Tokyo ( Hibiya ) using bullette train to Tokyo station
@ 1 day round trip to Mt.fuji Area 2 Nights Disneyland hotel

My question is What type of pass do I need and for how many days? What I understand that Japan rail pass is not valid for the bullette trains even If I bought the green pass, is this correct?

My second option is to fly to okinawa for 2 days instead of kyoto then flying again to tokyo

In this case do I need a rail pass?

Regards?