Can we use JR pass with our itinerary

Hello!

We will be travelling to Kapan Nov 3 (actually landing in Japan Nov 5) from USA.
We will arrive in Narita Airport.
Our hotel is Hilton in Tokyo. We will be there for 2 nights.
Then we will go to Kyoto for 1 night.
Then to Osaka/Kobe for the rest of the trip.

Will a JR pass work for our itinerary?
Please advise?
Thank you,
Irene